With the new implementation of the multisite functionality in WP 3.0, it's now possible to run multiple wordpress Websites from one wordpress installation. I have considered doing this going forward, but have since decided it might be best to keep things separate.
I think it will be easier to move from one host to another if needed, and will being in separate folders just eliminates any conflicts with files between domains such as sitemaps and htaccess.
I'd like to know what more experienced wordpress users and webmasters think about this subject.
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